主要論文

1. Kikuchi, J., Ogata, K. and Shinozaki, K.:
   " ECOMICS: ECosytem trans-OMICS tools and methods for complex environmental samples and datasets"
   J. Ecosys. Ecogr. S2 001 (2011)
2. Ogata, Y., Chikayama, E., Morioka, Y., Everroad, R.C., Shino, A., Matsushima, A., Haruna, H., Moriya, S., Toyoda, T., and Kikuchi, J.:
   " ECOMICS: A web-based toolkit for investigating the biomolecular web in ecosystems using a trans-omics approach"
   PLoS ONE 7, e30263 (2012).
3. Sekiyama, Y., Chikayama, E. and Kikuchi, J.:
   " Evaluation of a semipolar solvent system as a step toward heteronuclear multidimensional NMR-based metabolomics for 13C-labeled bacteria, plants, and animals."
   Anal. Chem. 83, 719-726 (2011).
4. Fukuda, S., Toh, H., Hase, K., Nakanishi, Y., Oshima, K., Yoshimura, K., Tobe, T., Clarke, J. M., Topping, D. L., Suzuki, T., Taylor, T. D., Itoh, K., Kikuchi, J., Morita, H., Hattori, M. and Ohno, H.:
   " Bifidobacteria protect from enteropathogenic infection through production of acetate."
   Nature 469, 543-547 (2011)
5. Nakanishi, Y., Fukuda, S., Chikayama, E. Kimura, Y., Ohno, H. and Kikuchi, J.:
   " Dynamic omics approach identifies nutrition-mediated microbial interactions."
   J. Proteome Res. 10, 824-831 (2011)
6. Sekiyama, Y., Chikayama, E. and Kikuchi, J.:
   " Profiling polar and semi-polar plant metabolites throughout extraction processes using a combined solution-state and HR-MAS NMR approach."
   Anal. Chem. 82, 1643-1652 (2010)
7. Chikayama, E., Sekiyama, E., Okamoto, M., Nakanishi, Y., Tsuboi, Y., Akiyama, K., Saito, K., Shinozaki, K. and Kikuchi, J.:
   " Statistical indices for simultaneous large-scale metabolite detections for a single NMR spectrum."
   Anal. Chem. 82, 1653-1658 (2010)
8. Ohyama, K., Suzuki, M., Kikuchi, J., Saito, K. and Muranaka, T.:
   " Dual biosynthetic pathways to phytosterol via cycloartenol and lanosterol in Arabidopsis."
   Proc. Natl. Acad. Sci. USA 106, 725-730 (2009)
9. Fukuda, S., Nakanishi, Y., Chikayama, E., Ohno, H., Hino, T. and Kikuchi, J.:
   " Evaluation and characterization of bacterial metabolic dynamics by a novel profiling technique, real-time metabolotyping."
   PLoS ONE 4, e4893 (2009)
10. Mochida, K., Furuta, T., Ebana, K., Shinozaki, K. and Kikuchi, J.:
    " Correlation exploration of metabolic and genomic diversities in rice."
    BMC Genomics. 10, 563 (2009)

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