Laboratory for Neural Circuit Theory
Our team attempts to clarify the functional roles of the brain circuitry in cognitive behaviors through computational analyses. Higher brain functions, such as learning and memory, motor planning and decision making, engage a wide variety of dynamical systems, from intracellular signaling cascades to interacting neuronal ensembles, in processing information. We study the mechanisms of neural information coding by study the dynamics and functions of networks of spiking neurons analytically or by simulating the behavior of realistic neurons and their networks numerically. Recently, we are particularly interested in understanding the network structure and computational functions of cortical microcircuits. The neuronal network occupying roughly a cubic millimeter of cortical volume can in several respects be regarded as the elementary functional unit of the neocortex. The unit has a six layer structure with a different distribution of neuron types in each layer. The structure exhibits a striking homogeneity across areas engaged in very different computational tasks. This raises a hope that universal laws can be discovered governing the neocortical processing of information. We attempt to create a prototypical model that captures the important properties of the cortical microcircuit. This is still challenging since even such a prototype model is currently not available. To achieve the above goal, we employ multiunit and juxtacellular recordings from the brain of behaving rats to obtain activities of multiple cortical neurons with those of identified neurons. In addition, we perform dynamic clamp experiments to test the hypotheses emerging from theoretical studies. We develop powerful data analysis methods to analyze the multiunit data.
- Modeling cortical microcircuits
- Analysis tools for multiunit data
- Information processing by neural networks
- Multiunit and juxtacellular recordings from the brain of behaving rats
- Neural mechanisms of decision making
- November 09, 2009
- Shaping the way we move
- Matthieu Gilson and Tomoki Fukai;
" Stability versus Neuronal Specialization for STDP: Long-Tail Weight Distributions Solve the Dilemma."
PLoS one 6(10): e25339 (2011). - Nobuhiko Wagatsuma, Tobias C. Potjans, Markus Diesmann, and Tomoki Fukai;
" Layer-dependent attentional processing by top-down signals in a visual cortical microcircuit model."
Frontiers in Computational Neuroscience 5: doi: 10.3389/fncom.2011.00031 (2011). - Takashi Takekawa, Yoshikazu Isomura, and Tomoki Fukai;
" Accurate spike-sorting for multiunit recordings."
European Journal of Neuroscience 31(2): 263-272 (2010). - Yoko Yazaki-Sugiyama, Siu Kang, Hideyuki Cateau, Tomoki Fukai, and Takao K. Hensch;
" Bidirectional plasticity in fast-spiking GABA circuits by visual experience."
Nature 462: 218-221 (2009). - Yoshikazu Isomura, Rie Harukuni, Takashi Takekawa, Hidenori Aizawa, and Tomoki Fukai;
" Microcircuitry coordination of cortical motor information in self-initiation of voluntary movements."
Nature Neuroscience 12: 1586-1593 (2009). - Hiroshi Okamoto and Tomoki Fukai;
" Recurrent network models for perfect temporal integration of fluctuating correlated inputs."
PLoS Computational Biology 5(6): e1000404 (2009). - Jun-nosuke Teramae and Tomoki Fukai;
" Temporal precision of spike response to fluctuating input in pulse-coupled networks of oscillating neurons."
Physical Review Letters 101: 248105 (2008). - Siu Kang, Katsunori Kitano and Tomoki Fukai;
" Structure of spontaneous UP and DOWN transitions self-organizing in a cortical network model."
PLoS Computational Biology 4(3): e1000022 (2008). - Keiji Miura, Yasuhiro Tsubo, Masato Okada and Tomoki Fukai;
" Balanced excitatory and inhibitory inputs to cortical neurons decouple firing irregularity from rate modulations."
The Journal of Neuroscience 27:13802-13812 (2007). - Yasuhiro Tsubo, Jun-nosuke Teramae, and Tomoki Fukai;
" Synchronization of excitatory neurons with strongly heterogeneous phase responses."
Physical Review Letters 99:228101 (2007).
Principal Investigator
- Tomoki FUKAI
- Laboratory Head
Members
- Junnosuke TERAMAE
- Deputy Laboratory Head
- Takashi TAKEKAWA
- Research Scientist
- Yasuhiro TSUBO
- Research Scientist
- Matthieu GILSON
- Research Scientist
- Florence KLEBERG
- Research Scientist
- Takashi HANDA
- Research Scientist
- Nobuhiko WAGATSUMA
- Research Scientist
- Kensuke ARAI
- Research Scientist
- Naoki HIRATANI
- Student Trainee
- Takatsuna SHIMAZAKI
- Student Trainee
- Rie HARUKUNI
- Technical Staff I
- Keiko SADAYASU
- Assistant
- Masato OKADA
- Senior Visiting Scientist
- Siu KANG
- Visiting Scientist
- Yoshikazu ISOMURA
- Visiting Scientist
- Yutaka SAKAI
- Visiting Scientist
- Katsunori KITANO
- Visiting Scientist
- Toshio AOYAGI
- Visiting Scientist
- Hiroshi OKAMOTO
- Visiting Scientist
- Alexander REYES
- Visiting Scientist
- Markus DIESMANN
- Visiting Scientist
- Moritz Julian HELIAS
- Visiting Scientist
- Hiroaki WAGATSUMA
- Visiting Scientist
- Siu KANG
- Visiting Scientist
- Jun TANI
- Visiting Scientist
- Cornelis Cyrinus VAN LEEUWEN
- Visiting Scientist
- Tatsunori HASHIMOTO
- Research Collaborative Advisor
- Yuka TAKEUCHI
- Part-time Staff

